Are the points just showing in the Other column for the first week? If so, it is probably because you chose not to reset points to zero when you ran the New Year Setup. With that option, it puts the remaining points from last year into the Other column for the first week.
You can reset all members points back to zero under Admin > Database Utilities > Misc. Procedures; but, it sounds like you have already entered other points/data, so that may not be a good option.
If what I described is the situation, you can set your club date to the first week, then on the check-in grid, just enter {zero} in the Other column, press the down arrow and repeat for all your clubbers. It should go pretty quickly.
It should update the Total Points correctly as you go, but it would be a good idea to go to Tools and run Recalculate Total Points also.